ApplyGatingML
Apply a Gating-ML file on an FCS data file (gate and/or transform list mode data)
Version: 1 |
Flow Cytometry |
* Public Server Only |
CompensateFCS
Compensates an FCS data file
Version: 1 |
Flow Cytometry |
* Public Server Only |
FCMFeatureExtraction
Calculation of features from clustered flow cytometry data.
Version: 1 |
Flow Cytometry |
* Public Server Only |
FCMSinglePanelQC
Single panel flow cytometry data quality control
Version: 1 |
Flow Cytometry |
* Public Server Only |
FCSNormalization
Per-channel basis normalization of flow cytometry data.
Version: 1 |
Flow Cytometry |
* Public Server Only |
FlowClustClassifyFCS
Classify flow cytometry data using the FlowClust algorithm.
Version: 1 |
Flow Cytometry |
* Public Server Only |
FlowFingerprinting
Takes a flow set and generates a description of the multivariate probability distribution function of its flow cytometry data in the form of a fingerprint
Version: 1 |
Flow Cytometry |
* Public Server Only |
FlowMeansCluster
Cluster flow cytometry data using the FlowMeans algorithm.
Version: 1 |
Flow Cytometry |
* Public Server Only |
FlowMergeCluster
Cluster flow cytometry data using FlowMerge.
Version: 1 |
Flow Cytometry |
* Public Server Only |
ImmPortCSV2TXT
Convert a .csv file to a .txt file that FLOCK can read
Version: 1 |
Flow Cytometry |
* Public Server Only |
ImmPortColSelection
Select a set of columns from a txt file
Version: 1 |
Flow Cytometry |
* Public Server Only |
ImmPortCrossSample
Applying an individual FLOCK result across another FCM sample (.txt) version 1 (1-round Kmeans)
Version: 1 |
Flow Cytometry |
* Public Server Only |
ImmPortFCSConvLogicleTrans
Logicle transformation of an fcs file to .txt file
Version: 1 |
Flow Cytometry |
* Public Server Only |
ImmPortFLOCK
Automated Gating with ImmPort FLOCK algorithm
Version: 1 |
Flow Cytometry |
* Public Server Only |
KMeansClassifyFCS
Find clusters in a flow cytometry file with k means clustering
Version: 1 |
Flow Cytometry |
* Public Server Only |
MClustClusterLabel
Model based labeling/matching of clusters (mate-clustering)
Version: 1 |
Flow Cytometry |
* Public Server Only |
MClustClusterLabelBIC
Bayesian information criterion (BIC) for model based labeling/matching of clusters; helps estimating the number of labels for MClustClusterLabel.
Version: 1 |
Flow Cytometry |
* Public Server Only |
PlateQAFCS
Look for consistency between wells of a single plate by computing summary statistics.
Version: 1 |
Flow Cytometry |
* Public Server Only |
SamSPECTRALClusterFCS
Cluster flow cytometry data using the SamSPECTRAL algorithm.
Version: 1 |
Flow Cytometry |
* Public Server Only |
SuggestNumberOfPopulationsFCS
The FlowClust module requires that you specify how many populations you are looking for. This module takes a data driven approach and attempts to discover how many populations are present in an FCS file
Version: 1 |
Flow Cytometry |
* Public Server Only |
AddFCSEventIndex
Adds indexes to events in a Flow Cytometry Standard (FCS) data file.
Version: 2 |
Flow Cytometry |
Module Repository |
AddFCSParameter
Add parameters and their values to a FCS data file
Version: 2 |
Flow Cytometry |
Module Repository |
AddNoiseToFCS
Add noise to specified parameters in an FCS data file.
Version: 2 |
Flow Cytometry |
Module Repository |
DeIdentifyFCS
DeIdentifyFCS an FCS data file; remove keywords from a list or matching a regular expression; useful to anonymize FCS data files and/or to remove specific (e.g., clinical) information
Version: 1 |
Flow Cytometry |
Module Repository |
ExtractFCSDataset
Extract one or more FCS datasets from an FCS data file
Version: 2 |
Flow Cytometry |
Module Repository |
ExtractFCSKeywords
Extracts keyword(s) value(s) from a Flow Cytometry Standard (FCS) file.
Version: 2 |
Flow Cytometry |
Module Repository |
ExtractFCSParameters
Extract specified parameters (dimensions) from an FCS data file.
Version: 2 |
Flow Cytometry |
Module Repository |
FLAMEPreprocess
Performs preprocessing of .fcs or .txt flow cytometric data files
Version: 4.1 |
Flow Cytometry |
Module Repository |
LogicleTransformFCS
Logicle transformation of (selected) parameters in a list mode FCS data file.
Version: 1 |
Flow Cytometry |
Module Repository |
MergeFCSDataFiles
Merge multiple FCS data files into a single FCS datasets; includes multimple subsampling options.
Version: 1 |
Flow Cytometry |
Module Repository |
PreviewFCS
Allows viewing of structural metadata, parameters, and descriptive statistics from a Flow Cytometry Standard (FCS) data file
Version: 2 |
Flow Cytometry |
Module Repository |
RemoveSaturatedFCSEvents
Remove saturated events from an FCS data file
Version: 1 |
Flow Cytometry |
Module Repository |
SetFCSKeywords
Sets keyword/value(s) in a Flow Cytometry Standard (FCS) file.
Version: 2 |
Flow Cytometry |
Module Repository |