GenePattern Team Blog


Java 7 update 51 blocks GenePattern visualizers

Posted on Tuesday, January 21, 2014 at 04:37PM by David Eby

UPDATE MARCH 17, 2017 : Java applet visualizers no longer work in any browser. Please click here to read the blog post.


A new Java update (7u51) was released by Oracle a week ago and - as has been the pattern with other recent updates - once again tightens security on applets run …

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GenePattern server coverage December 23 - January 2

Posted on Thursday, December 19, 2013 at 12:41PM by GenePattern Team

From December 21 to January 1, the GenePattern team will be unavailable due to the year-end closing of the Broad Institute.  During this time, the GenePattern servers and repositories (including GParc) will remain up and fully functional. We will be monitoring this daily and, should anything happen to disrupt service …

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Using GenePattern with Mac OS X 10.9 Mavericks

Posted on Monday, December 02, 2013 at 10:49AM by Barbara Hill Meyers

Since the release of Mac OS X 10.9 (Mavericks) on Oct 22, 2013,  many of you may have already upgraded or are considering doing so, given the ease of access to this upgrade. Some of you have reported problems with GenePattern on this new OS and we have observed …

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GenePattern and the latest Java 7 update (45)

Posted on Thursday, November 21, 2013 at 11:06AM by Barbara Hill Meyers

UPDATE MARCH 17, 2017 : Java applet visualizers no longer work in any browser. Please click here to read the blog post.


Since the release of Java 7 update 45 (Oct 15, 2013) there have been some reports of difficulties with Java and GenePattern visualizers.

Release notes from Oracle can be …

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Using Dropbox in GenePattern via GenomeSpace

Posted on Tuesday, October 01, 2013 at 04:50PM by GenePattern Team

The folks here on the GenePattern and GenomeSpace teams thought it might be nice to point out a little "pro tip" for you Dropbox users out there.

Back in July GenomeSpace announced the ability to connect to your Dropbox files via GenomeSpace. Which means, you can also use your Dropbox …

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